Information for 7-GGAGGCTGAGGC (Motif 13)


Reverse Opposite:

p-value:1e-277
log p-value:-6.387e+02
Information Content per bp:1.777
Number of Target Sequences with motif29472.0
Percentage of Target Sequences with motif37.12%
Number of Background Sequences with motif24780.0
Percentage of Background Sequences with motif31.17%
Average Position of motif in Targets164.2 +/- 83.2bp
Average Position of motif in Background163.1 +/- 98.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGAGGCTGAGGC---
-CAGGCCNNGGCCNN

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGGCTGAGGC
--TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGGCTGAGGC
--DGGGYGKGGC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAGGCTGAGGC
--GGGGNGGGGC

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAGGCTGAGGC-
--TGGGTGTGGCN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGGCTGAGGC-
-NTGGGTGTGGCC

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGAGGCTGAGGC
ACAGGATGTGGT

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGAGGCTGAGGC
----GCTGACGC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGGCTGAGGC
--TGGGTGTGGC

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGGCTGAGGC---
ATTGCCTGAGGCAAT