Information for 8-RTTCARGYAWTT (Motif 14)


Reverse Opposite:

p-value:1e-252
log p-value:-5.816e+02
Information Content per bp:1.625
Number of Target Sequences with motif17006.0
Percentage of Target Sequences with motif21.42%
Number of Background Sequences with motif13324.2
Percentage of Background Sequences with motif16.76%
Average Position of motif in Targets164.1 +/- 85.8bp
Average Position of motif in Background163.2 +/- 99.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------RTTCARGYAWTT
GACCACATTCATACAAT-

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--RTTCARGYAWTT
ACATTCATGACACG

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RTTCARGYAWTT-
NANTTCATTGAATTA

PH0009.1_Bsx/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RTTCARGYAWTT-----
-NTNAGNTAATTACCTN

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---RTTCARGYAWTT--
ATGGTTCAATAATTTTG

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RTTCARGYAWTT----
NATTTAAGTACTTNAAA

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---RTTCARGYAWTT--
NANTTTCAAGTGGTTAN

PB0162.1_Sfpi1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RTTCARGYAWTT-
GGTTCCNNAATTTG

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RTTCARGYAWTT-------
RTTKCADNNKRTTGCATNAN

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RTTCARGYAWTT--
AANTTCAAGTGGCTTN