Information for 10-ACCTGGAAAAKC (Motif 17)


Reverse Opposite:

p-value:1e-203
log p-value:-4.684e+02
Information Content per bp:1.897
Number of Target Sequences with motif873.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif253.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets160.2 +/- 87.4bp
Average Position of motif in Background156.6 +/- 96.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:ACCTGGAAAAKC
---TGGAAAA--

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACCTGGAAAAKC
-AATGGAAAAT-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGGAAAAKC-
TTTCCTGGAAAGNNN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACCTGGAAAAKC
-CSTGGGAAAD-

MA0105.3_NFKB1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCTGGAAAAKC--
---GGGAAATTCCC

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACCTGGAAAAKC
NTTTCCNGGAAA---

MA0107.1_RELA/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACCTGGAAAAKC--
----GGAAATTCCC

MA0137.3_STAT1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGGAAAAKC
TTTCCTGGAAA---

MA0101.1_REL/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACCTGGAAAAKC--
----GGAAANCCCC

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACCTGGAAAAKC
NNCACCTGNN-----