Information for 12-AAAAGCGCAGTA (Motif 18)


Reverse Opposite:

p-value:1e-180
log p-value:-4.154e+02
Information Content per bp:1.822
Number of Target Sequences with motif561.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif124.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets159.5 +/- 99.0bp
Average Position of motif in Background178.5 +/- 97.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCGCAGTA
GAAAAAATTGCAAGG

MA0483.1_Gfi1b/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAAGCGCAGTA
-AAATCACAGCA

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAAAGCGCAGTA
TCNNTTTACAGCGNNNT-

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGCGCAGTA
ANGNAAAGGTCA---

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AAAAGCGCAGTA
----GGTAAGTA

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAAGCGCAGTA---
AAAAACGGATTATTG

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCGCAGTA-
GGCAAAAGTCCAATAA

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------AAAAGCGCAGTA
TCNCTTTACAGCGNNNT-

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAAAGCGCAGTA
CAAAGGTCAG--

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAAAGCGCAGTA-----
NNNACCTCATTATCNTN