Information for 11-GCTGGAAC (Motif 19)


Reverse Opposite:

p-value:1e-174
log p-value:-4.015e+02
Information Content per bp:1.946
Number of Target Sequences with motif22085.0
Percentage of Target Sequences with motif27.81%
Number of Background Sequences with motif18674.0
Percentage of Background Sequences with motif23.49%
Average Position of motif in Targets163.9 +/- 89.8bp
Average Position of motif in Background163.3 +/- 104.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCTGGAAC
CWGGCGGGAA-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTGGAAC--
CCAGGAACAG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAC-
GGCGGGAARN

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGAAC-----
NNGATCTAGAACCTNNN

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCTGGAAC-
GGGCGGGAAGG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGAAC--
TGGCGGGAAAHB

MA0152.1_NFATC2/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTGGAAC-
--TGGAAAA

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTGGAAC--
CCWGGAATGY

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAAC
NGCTN----

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAAC-
GGCGGGAAAH