Information for 1-TATTTTTAGTAT (Motif 2)


Reverse Opposite:

p-value:1e-567
log p-value:-1.306e+03
Information Content per bp:1.731
Number of Target Sequences with motif26267.0
Percentage of Target Sequences with motif33.08%
Number of Background Sequences with motif19869.4
Percentage of Background Sequences with motif24.99%
Average Position of motif in Targets164.3 +/- 78.3bp
Average Position of motif in Background163.4 +/- 88.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0497.1_MEF2C/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TATTTTTAGTAT
TTCTATTTTTAGNNN

MA0052.2_MEF2A/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TATTTTTAGTAT
NNGCTATTTTTAGCN-

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTTAGTAT
KCTATTTTTRGH--

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TATTTTTAGTAT--
NNTTTTTCTTATNT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TATTTTTAGTAT
CTATTTTTGG---

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTTAGTAT--
GNNATTTGTCGTAANN

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TATTTTTAGTAT---
NTNAATTTTATTGNATT

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TATTTTTAGTAT-
GNATTTTTTTTTTGANC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATTTTTAGTAT--
TTTTTTTTCNNGTN

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TATTTTTAGTAT
NTNTTGTTGTTTGTN-