Information for 15-TCAGAGGGTGCA (Motif 23)


Reverse Opposite:

p-value:1e-159
log p-value:-3.681e+02
Information Content per bp:1.709
Number of Target Sequences with motif1434.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif643.5
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets162.0 +/- 89.4bp
Average Position of motif in Background162.7 +/- 102.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCAGAGGGTGCA
-CAGATGGC---

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAGGGTGCA---
NGAGGTCANNGAGTTCANNN

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGGGTGCA
AACAGATGGTCN-

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGGGTGCA
AACAGATGGC---

MA0074.1_RXRA::VDR/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGGGTGCA
GGGTCAACGAGTTCA

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCAGAGGGTGCA-
AAGGCCAGATGGTCCGG

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TCAGAGGGTGCA
NANAGATCAAAGGGNNN-

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCAGAGGGTGCA
ACWTCAAAGG-----

MA0155.1_INSM1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCAGAGGGTGCA
TGTCAGGGGGCG--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCAGAGGGTGCA
TGCGTGGGYG--