Information for 14-TGCTAGCRCA (Motif 27)


Reverse Opposite:

p-value:1e-113
log p-value:-2.625e+02
Information Content per bp:1.894
Number of Target Sequences with motif746.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif285.3
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets165.6 +/- 87.6bp
Average Position of motif in Background153.7 +/- 108.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTAGCRCA
NNCGTTGCTATGGNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCTAGCRCA-
-CCAGGAACAG

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TGCTAGCRCA----
NTNNNNNGTTGCTANGGNNCANA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TGCTAGCRCA-
CTAAGGTTCTAGATCAC

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCTAGCRCA
CTGTTGCTAGGS--

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTAGCRCA
NCCGTTGCTANGNGN

MA0150.2_Nfe2l2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCTAGCRCA-----
TGCTGAGTCATNNTG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCTAGCRCA
TGCTGACTCA

MA0501.1_NFE2::MAF/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGCTAGCRCA-
AAANTGCTGAGTCAT

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTAGCRCA--
TGCTGAGTCATC