Information for 17-TGAAATCTAG (Motif 29)


Reverse Opposite:

p-value:1e-90
log p-value:-2.089e+02
Information Content per bp:1.980
Number of Target Sequences with motif488.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif166.8
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets161.0 +/- 98.5bp
Average Position of motif in Background162.2 +/- 103.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGAAATCTAG---
NNNCTGATATCTCNNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAATCTAG
ACTGAAACCA--

MA0009.1_T/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAAATCTAG
TTCACACCTAG

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGAAATCTAG---
AAGGCGAAATCATCGCA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAAATCTAG--------
-NNGATCTAGAACCTNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------TGAAATCTAG----
NNNNNCGATANNATCTNNNNAN

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGAAATCTAG--
GTATTGACAGCTNNTT

MA0038.1_Gfi1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGAAATCTAG-
-CAAATCACTG

MA0466.1_CEBPB/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGAAATCTAG
ATTGTGCAATA---

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGAAATCTAG
TTTGAAACCG--