Information for 2-TGAAACCCCRTC (Motif 3)


Reverse Opposite:

p-value:1e-519
log p-value:-1.195e+03
Information Content per bp:1.711
Number of Target Sequences with motif21672.0
Percentage of Target Sequences with motif27.29%
Number of Background Sequences with motif15963.6
Percentage of Background Sequences with motif20.08%
Average Position of motif in Targets164.4 +/- 79.4bp
Average Position of motif in Background163.7 +/- 88.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGAAACCCCRTC
ACTGAAACCA----

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
ANANGTGATACCCTATN

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
ANNNATGATACCCCATC

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
ANANGTGATACCCCATT

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
ANANNTGATACCCTATN

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
AATNTTGATACCCTATN

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TGAAACCCCRTC
ANANNTGATACCCNATN

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGAAACCCCRTC
GGAAANCCCC--

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGAAACCCCRTC
CGTATCGAAACCAAA--

MA0107.1_RELA/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGAAACCCCRTC
GGAAATTCCC--