Information for 21-CCGATTTT (Motif 38)


Reverse Opposite:

p-value:1e-35
log p-value:-8.247e+01
Information Content per bp:1.530
Number of Target Sequences with motif373.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif180.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets159.5 +/- 98.8bp
Average Position of motif in Background170.6 +/- 87.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCGATTTT-----
TGTTCCCATTGTGTACT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGATTTT---
-CTATTTTTGG

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCGATTTT----
TTTTACGACTTTCCAT

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCGATTTT
CNGTGATTTN

MA0497.1_MEF2C/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGATTTT------
TTCTATTTTTAGNNN

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGATTTT----
KCTATTTTTRGH

MA0052.2_MEF2A/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGATTTT-----
NNGCTATTTTTAGCN

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGATTTT---
CCTTGCAATTTTTNN

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CCGATTTT--
NNTAAAAACGATGTTNT

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGATTTT-
GCNGCCATCTTG