Information for 24-GAGGAGCGCCTC (Motif 39)


Reverse Opposite:

p-value:1e-31
log p-value:-7.301e+01
Information Content per bp:1.911
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets163.9 +/- 90.6bp
Average Position of motif in Background161.6 +/- 88.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGGAGCGCCTC
-CGGAGC-----

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAGCGCCTC
GGGAGGACNG----

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGGAGCGCCTC
---CAGCC----

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGCGCCTC---
NNNGGGGCGCCCCCNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGCGCCTC
TGGGGA-------

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAGGAGCGCCTC
ADGGYAGYAGCATCT-

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GAGGAGCGCCTC-
NTNNNAGGAGTCTCNTN

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAGGAGCGCCTC-----
--GGNGCGNCTGTTNNN

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAGGAGCGCCTC---
NTCGCGCGCCTTNNN

MA0130.1_ZNF354C/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAGGAGCGCCTC
GTGGAT------