Information for 25-TTATTATT (Motif 41)


Reverse Opposite:

p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.530
Number of Target Sequences with motif1927.0
Percentage of Target Sequences with motif2.43%
Number of Background Sequences with motif1728.7
Percentage of Background Sequences with motif2.17%
Average Position of motif in Targets163.2 +/- 108.4bp
Average Position of motif in Background165.8 +/- 109.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----TTATTATT---
NCNTTTGTTATTTNN

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TTATTATT
-AATTATT

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTATT---
NNTAATTATAATTNNN

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----TTATTATT---
TTTAATTATAATTAAG

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTATT---
NANTATTATAATTNNN

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTATTATT----
NTNTTGTTGTTTGTN

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTATTATT-----
NNTTTATTGTTCTNNN

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TTATTATT-----
GTATCTATTGTTCTTTA

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTATT--
NNNTGTTGTTGTTNG

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTATTATT------
TAATTGTTCTAAAC