Information for 4-RAYCTCSTGATC (Motif 6)


Reverse Opposite:

p-value:1e-432
log p-value:-9.959e+02
Information Content per bp:1.687
Number of Target Sequences with motif23119.0
Percentage of Target Sequences with motif29.12%
Number of Background Sequences with motif17746.2
Percentage of Background Sequences with motif22.32%
Average Position of motif in Targets164.4 +/- 83.0bp
Average Position of motif in Background164.8 +/- 91.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RAYCTCSTGATC
-ACCACGTGAC-

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--RAYCTCSTGATC---
GCAACCTCATTATNNNN

MA0093.2_USF1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RAYCTCSTGATC
-GCCACGTGACC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RAYCTCSTGATC---
NNNACCTCATTATCNTN

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RAYCTCSTGATC--
--TCACGTGACCGG

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RAYCTCSTGATC-
CTTATCTCHMCATCT

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RAYCTCSTGATC
-RTCATGTGAC-

MA0156.1_FEV/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RAYCTCSTGATC
-ATTTCCTG---

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAYCTCSTGATC
-ACCACGTG---

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:RAYCTCSTGATC-
-------TGACCT