Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 79396)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 79519)	% of Background Sequences with Motif
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-207	-4.783e+02	0.0000	18674.0	23.52%	15188.2	19.10%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-200	-4.617e+02	0.0000	17462.0	21.99%	14127.3	17.77%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-104	-2.396e+02	0.0000	32278.0	40.65%	29342.5	36.91%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-76	-1.767e+02	0.0000	40675.0	51.22%	38101.3	47.93%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e-74	-1.709e+02	0.0000	33539.0	42.24%	31051.9	39.06%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-72	-1.666e+02	0.0000	33392.0	42.05%	30938.1	38.92%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-64	-1.484e+02	0.0000	15335.0	19.31%	13519.3	17.01%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-61	-1.410e+02	0.0000	7344.0	9.25%	6073.3	7.64%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-59	-1.376e+02	0.0000	14933.0	18.81%	13203.5	16.61%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-59	-1.367e+02	0.0000	39473.0	49.71%	37222.2	46.82%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-57	-1.332e+02	0.0000	45550.0	57.36%	43348.7	54.53%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-48	-1.127e+02	0.0000	51789.0	65.22%	49845.7	62.70%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-37	-8.641e+01	0.0000	9281.0	11.69%	8167.7	10.27%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-34	-8.006e+01	0.0000	11187.0	14.09%	10022.8	12.61%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-34	-8.003e+01	0.0000	35743.0	45.01%	34054.9	42.84%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-31	-7.264e+01	0.0000	22749.0	28.65%	21295.5	26.79%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-31	-7.264e+01	0.0000	15463.0	19.47%	14195.2	17.86%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-22	-5.201e+01	0.0000	54918.0	69.16%	53684.0	67.53%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-19	-4.538e+01	0.0000	5007.0	6.31%	4407.7	5.54%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-18	-4.323e+01	0.0000	5513.0	6.94%	4900.1	6.16%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-17	-4.088e+01	0.0000	6249.0	7.87%	5617.9	7.07%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e-16	-3.862e+01	0.0000	44439.0	55.96%	43308.9	54.48%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e-15	-3.476e+01	0.0000	2202.0	2.77%	1856.0	2.33%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-14	-3.225e+01	0.0000	17201.0	21.66%	16343.4	20.56%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-13	-3.014e+01	0.0000	3520.0	4.43%	3112.9	3.92%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e-11	-2.721e+01	0.0000	2833.0	3.57%	2486.9	3.13%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-11	-2.559e+01	0.0000	4624.0	5.82%	4197.1	5.28%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-7	-1.818e+01	0.0000	5657.0	7.12%	5268.9	6.63%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-7	-1.698e+01	0.0000	8899.0	11.21%	8440.4	10.62%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e-6	-1.527e+01	0.0000	5903.0	7.43%	5545.0	6.97%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-6	-1.522e+01	0.0000	36048.0	45.40%	35385.7	44.51%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-6	-1.406e+01	0.0000	2782.0	3.50%	2544.0	3.20%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-5	-1.328e+01	0.0000	3292.0	4.15%	3041.1	3.83%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-5	-1.299e+01	0.0000	791.0	1.00%	670.5	0.84%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-5	-1.282e+01	0.0000	7038.0	8.86%	6687.4	8.41%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-4	-1.085e+01	0.0001	3303.0	4.16%	3080.8	3.88%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-4	-1.042e+01	0.0002	5134.0	6.47%	4867.0	6.12%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e-4	-9.822e+00	0.0004	2689.0	3.39%	2499.1	3.14%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-4	-9.220e+00	0.0007	7872.0	9.91%	7571.3	9.52%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-3	-9.193e+00	0.0007	5093.0	6.41%	4846.6	6.10%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-3	-9.020e+00	0.0008	497.0	0.63%	420.9	0.53%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-3	-8.987e+00	0.0008	24827.0	31.27%	24379.1	30.67%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-3	-8.593e+00	0.0011	6370.0	8.02%	6108.9	7.68%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-3	-7.427e+00	0.0036	9653.0	12.16%	9368.5	11.78%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-3	-7.292e+00	0.0040	9695.0	12.21%	9413.5	11.84%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-3	-7.124e+00	0.0045	1149.0	1.45%	1047.8	1.32%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-3	-7.124e+00	0.0045	1149.0	1.45%	1047.8	1.32%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e-3	-6.941e+00	0.0053	460.0	0.58%	397.7	0.50%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e-2	-6.204e+00	0.0109	1520.0	1.91%	1413.6	1.78%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-2	-6.132e+00	0.0115	9219.0	11.61%	8974.8	11.29%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e-2	-5.964e+00	0.0133	3605.0	4.54%	3447.8	4.34%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-2	-5.848e+00	0.0146	454.0	0.57%	398.5	0.50%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-5.801e+00	0.0151	578.0	0.73%	515.8	0.65%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-2	-5.693e+00	0.0165	22530.0	28.37%	22214.0	27.94%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-2	-5.185e+00	0.0269	6269.0	7.89%	6085.0	7.65%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-2	-5.158e+00	0.0271	8704.0	10.96%	8493.5	10.68%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e-2	-4.760e+00	0.0397	3881.0	4.89%	3743.0	4.71%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-4.452e+00	0.0531	3685.0	4.64%	3556.1	4.47%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-1	-4.169e+00	0.0692	3455.0	4.35%	3336.6	4.20%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e-1	-3.992e+00	0.0812	94.0	0.12%	75.2	0.09%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-1	-3.954e+00	0.0830	2498.0	3.15%	2400.8	3.02%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-1	-3.756e+00	0.0995	34968.0	44.04%	34731.0	43.69%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-3.534e+00	0.1223	6285.0	7.92%	6149.8	7.74%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-3.488e+00	0.1261	8418.0	10.60%	8266.6	10.40%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e-1	-3.313e+00	0.1478	2393.0	3.01%	2310.8	2.91%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-1	-3.298e+00	0.1478	11439.0	14.41%	11276.8	14.18%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e-1	-3.112e+00	0.1754	1012.0	1.27%	960.3	1.21%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e-1	-2.742e+00	0.2501	3194.0	4.02%	3114.0	3.92%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e-1	-2.612e+00	0.2808	19541.0	24.61%	19388.6	24.39%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-1	-2.610e+00	0.2808	10091.0	12.71%	9967.4	12.54%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-2.533e+00	0.2952	4009.0	5.05%	3927.9	4.94%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-2.518e+00	0.2957	21496.0	27.07%	21347.0	26.85%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e-1	-2.407e+00	0.3257	609.0	0.77%	577.3	0.73%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e-1	-2.342e+00	0.3431	2586.0	3.26%	2524.9	3.18%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-1	-2.336e+00	0.3431	22866.0	28.80%	22727.9	28.59%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-2.126e+00	0.4144	9620.0	12.12%	9523.2	11.98%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.856e+00	0.5358	11239.0	14.15%	11153.2	14.03%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.704e+00	0.6158	14614.0	18.40%	14532.8	18.28%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.660e+00	0.6354	961.0	1.21%	935.5	1.18%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.652e+00	0.6354	823.0	1.04%	799.3	1.01%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.587e+00	0.6667	19126.0	24.09%	19049.1	23.96%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.515e+00	0.7075	1272.0	1.60%	1246.4	1.57%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.305e+00	0.8624	1101.0	1.39%	1082.6	1.36%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.277e+00	0.8762	1855.0	2.34%	1832.3	2.30%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.265e+00	0.8762	856.0	1.08%	840.4	1.06%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.255e+00	0.8762	2690.0	3.39%	2664.7	3.35%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-1.228e+00	0.8885	9636.0	12.14%	9597.8	12.07%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-1.138e+00	0.9611	302.0	0.38%	294.7	0.37%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.084e+00	1.0000	11509.0	14.49%	11481.0	14.44%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.058e+00	1.0000	5604.0	7.06%	5583.0	7.02%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e0	-1.039e+00	1.0000	8765.0	11.04%	8742.4	11.00%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-9.287e-01	1.0000	843.0	1.06%	836.3	1.05%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	-9.151e-01	1.0000	1952.0	2.46%	1943.8	2.45%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-9.130e-01	1.0000	7652.0	9.64%	7640.8	9.61%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-8.946e-01	1.0000	155.0	0.20%	152.1	0.19%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-8.403e-01	1.0000	6093.0	7.67%	6087.7	7.66%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-7.375e-01	1.0000	22889.0	28.83%	22909.3	28.82%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-6.836e-01	1.0000	15919.0	20.05%	15939.4	20.05%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-6.777e-01	1.0000	690.0	0.87%	691.6	0.87%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-6.494e-01	1.0000	1708.0	2.15%	1713.0	2.15%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-6.166e-01	1.0000	137.0	0.17%	138.6	0.17%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-5.861e-01	1.0000	2639.0	3.32%	2649.7	3.33%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-5.391e-01	1.0000	14018.0	17.65%	14057.4	17.68%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-5.191e-01	1.0000	1818.0	2.29%	1830.2	2.30%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-3.549e-01	1.0000	133.0	0.17%	139.0	0.17%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.343e-01	1.0000	1444.0	1.82%	1467.7	1.85%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-2.916e-01	1.0000	5308.0	6.68%	5361.3	6.74%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.874e-01	1.0000	1066.0	1.34%	1090.0	1.37%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-2.735e-01	1.0000	376.0	0.47%	391.0	0.49%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.540e-01	1.0000	5216.0	6.57%	5275.5	6.64%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-2.484e-01	1.0000	3264.0	4.11%	3311.1	4.16%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.262e-01	1.0000	2091.0	2.63%	2131.8	2.68%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-2.227e-01	1.0000	485.0	0.61%	504.7	0.63%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.158e-01	1.0000	563.0	0.71%	584.3	0.73%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-1.999e-01	1.0000	6161.0	7.76%	6237.8	7.85%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-1.989e-01	1.0000	7459.0	9.39%	7543.3	9.49%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.794e-01	1.0000	13376.0	16.85%	13495.1	16.97%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-1.607e-01	1.0000	2467.0	3.11%	2521.3	3.17%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-1.515e-01	1.0000	7679.0	9.67%	7779.0	9.78%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-1.467e-01	1.0000	6994.0	8.81%	7090.3	8.92%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.375e-01	1.0000	4918.0	6.19%	5001.4	6.29%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.295e-01	1.0000	586.0	0.74%	615.5	0.77%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.224e-01	1.0000	634.0	0.80%	665.1	0.84%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.133e-01	1.0000	9021.0	11.36%	9143.4	11.50%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.036e-01	1.0000	5154.0	6.49%	5250.5	6.60%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-9.320e-02	1.0000	1101.0	1.39%	1147.4	1.44%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-8.890e-02	1.0000	11011.0	13.87%	11158.1	14.04%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-7.630e-02	1.0000	3622.0	4.56%	3712.1	4.67%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-6.706e-02	1.0000	28900.0	36.40%	29140.5	36.65%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-6.566e-02	1.0000	1987.0	2.50%	2057.2	2.59%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-5.927e-02	1.0000	4371.0	5.50%	4478.8	5.63%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.755e-02	1.0000	2093.0	2.64%	2172.6	2.73%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-4.619e-02	1.0000	5466.0	6.88%	5595.0	7.04%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-3.764e-02	1.0000	2462.0	3.10%	2553.1	3.21%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-3.494e-02	1.0000	2480.0	3.12%	2573.2	3.24%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-3.354e-02	1.0000	339.0	0.43%	374.0	0.47%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-3.008e-02	1.0000	1342.0	1.69%	1413.7	1.78%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-2.634e-02	1.0000	9954.0	12.54%	10148.4	12.77%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-2.295e-02	1.0000	7702.0	9.70%	7879.2	9.91%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.960e-02	1.0000	1385.0	1.74%	1464.0	1.84%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.688e-02	1.0000	7307.0	9.20%	7490.2	9.42%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.628e-02	1.0000	14737.0	18.56%	14990.8	18.86%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.462e-02	1.0000	6378.0	8.03%	6554.8	8.24%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.305e-02	1.0000	6345.0	7.99%	6524.1	8.21%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-1.151e-02	1.0000	586.0	0.74%	643.3	0.81%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-1.149e-02	1.0000	215.0	0.27%	250.2	0.31%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.103e-02	1.0000	2536.0	3.19%	2654.3	3.34%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-9.922e-03	1.0000	128.0	0.16%	156.1	0.20%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-9.470e-03	1.0000	49.0	0.06%	67.6	0.08%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-8.506e-03	1.0000	4415.0	5.56%	4576.4	5.76%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-6.623e-03	1.0000	1030.0	1.30%	1112.8	1.40%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-6.389e-03	1.0000	7970.0	10.04%	8192.8	10.31%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-6.256e-03	1.0000	3773.0	4.75%	3929.1	4.94%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-6.142e-03	1.0000	886.0	1.12%	963.0	1.21%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-5.339e-03	1.0000	1896.0	2.39%	2010.8	2.53%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-4.181e-03	1.0000	3559.0	4.48%	3719.1	4.68%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.481e-03	1.0000	491.0	0.62%	556.1	0.70%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.724e-03	1.0000	1118.0	1.41%	1219.5	1.53%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.715e-03	1.0000	494.0	0.62%	562.7	0.71%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-9.650e-04	1.0000	46.0	0.06%	70.8	0.09%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-6.580e-04	1.0000	2591.0	3.26%	2758.6	3.47%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-5.670e-04	1.0000	5674.0	7.15%	5921.0	7.45%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-5.660e-04	1.0000	4225.0	5.32%	4439.4	5.58%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-4.980e-04	1.0000	8833.0	11.12%	9138.1	11.49%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-4.050e-04	1.0000	5069.0	6.38%	5309.6	6.68%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-3.750e-04	1.0000	21700.0	27.33%	22151.6	27.86%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-3.680e-04	1.0000	2668.0	3.36%	2847.0	3.58%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-2.300e-04	1.0000	747.0	0.94%	847.9	1.07%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.610e-04	1.0000	1921.0	2.42%	2083.8	2.62%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.510e-04	1.0000	11407.0	14.37%	11781.6	14.82%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.440e-04	1.0000	6329.0	7.97%	6617.8	8.32%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.190e-04	1.0000	15343.0	19.32%	15773.4	19.84%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.080e-04	1.0000	1904.0	2.40%	2070.8	2.60%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-6.800e-05	1.0000	3789.0	4.77%	4027.6	5.07%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-6.600e-05	1.0000	799.0	1.01%	912.5	1.15%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-5.600e-05	1.0000	7186.0	9.05%	7511.7	9.45%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-5.100e-05	1.0000	888.0	1.12%	1009.2	1.27%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-4.900e-05	1.0000	606.0	0.76%	707.8	0.89%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.100e-05	1.0000	464.0	0.58%	554.5	0.70%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.400e-05	1.0000	40615.0	51.15%	41225.7	51.86%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.500e-05	1.0000	1159.0	1.46%	1307.6	1.64%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-1.500e-05	1.0000	4969.0	6.26%	5265.4	6.62%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.400e-05	1.0000	8156.0	10.27%	8529.2	10.73%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.000e-05	1.0000	7596.0	9.57%	7963.8	10.02%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-1.000e-05	1.0000	5819.0	7.33%	6145.6	7.73%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-6.000e-06	1.0000	521.0	0.66%	627.1	0.79%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-3.000e-06	1.0000	376.0	0.47%	470.1	0.59%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-3.000e-06	1.0000	9474.0	11.93%	9902.7	12.46%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-1.000e-06	1.0000	47574.0	59.91%	48278.9	60.73%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.000e-06	1.0000	1387.0	1.75%	1569.0	1.97%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.000e-06	1.0000	4799.0	6.04%	5134.2	6.46%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.000e-06	1.0000	7200.0	9.07%	7605.4	9.57%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.000e-06	1.0000	1607.0	2.02%	1808.2	2.27%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-0.000e+00	1.0000	4956.0	6.24%	5311.6	6.68%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-0.000e+00	1.0000	3364.0	4.24%	3661.8	4.61%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-0.000e+00	1.0000	3470.0	4.37%	3777.2	4.75%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-0.000e+00	1.0000	2498.0	3.15%	2762.1	3.47%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-0.000e+00	1.0000	1745.0	2.20%	1968.2	2.48%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-0.000e+00	1.0000	13636.0	17.17%	14211.5	17.88%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-0.000e+00	1.0000	649.0	0.82%	791.8	1.00%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-0.000e+00	1.0000	11192.0	14.09%	11725.1	14.75%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-0.000e+00	1.0000	1095.0	1.38%	1282.1	1.61%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-0.000e+00	1.0000	505.0	0.64%	636.5	0.80%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-0.000e+00	1.0000	869.0	1.09%	1038.1	1.31%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-0.000e+00	1.0000	4397.0	5.54%	4763.7	5.99%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-0.000e+00	1.0000	15877.0	19.99%	16546.3	20.81%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-0.000e+00	1.0000	13695.0	17.25%	14351.5	18.05%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-0.000e+00	1.0000	42055.0	52.96%	42954.7	54.03%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-0.000e+00	1.0000	7410.0	9.33%	7924.5	9.97%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-0.000e+00	1.0000	11043.0	13.91%	11658.0	14.66%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-0.000e+00	1.0000	14080.0	17.73%	14760.0	18.57%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-0.000e+00	1.0000	5160.0	6.50%	5605.2	7.05%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-0.000e+00	1.0000	4338.0	5.46%	4751.9	5.98%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-0.000e+00	1.0000	4137.0	5.21%	4545.0	5.72%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-0.000e+00	1.0000	13884.0	17.49%	14590.5	18.35%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-0.000e+00	1.0000	2888.0	3.64%	3242.1	4.08%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-0.000e+00	1.0000	12981.0	16.35%	13677.4	17.20%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-0.000e+00	1.0000	7215.0	9.09%	7766.3	9.77%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-0.000e+00	1.0000	4914.0	6.19%	5384.7	6.77%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-0.000e+00	1.0000	1139.0	1.43%	1383.5	1.74%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-0.000e+00	1.0000	314.0	0.40%	450.8	0.57%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-0.000e+00	1.0000	1256.0	1.58%	1519.7	1.91%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-0.000e+00	1.0000	5130.0	6.46%	5642.4	7.10%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-0.000e+00	1.0000	2979.0	3.75%	3378.1	4.25%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e0	-0.000e+00	1.0000	19848.0	25.00%	20748.5	26.10%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-0.000e+00	1.0000	3119.0	3.93%	3535.1	4.45%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-0.000e+00	1.0000	21128.0	26.61%	22091.6	27.79%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-0.000e+00	1.0000	11093.0	13.97%	11854.7	14.91%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-0.000e+00	1.0000	13671.0	17.22%	14514.5	18.26%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-0.000e+00	1.0000	14477.0	18.23%	15346.8	19.30%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-0.000e+00	1.0000	13143.0	16.55%	13982.0	17.59%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-0.000e+00	1.0000	24190.0	30.46%	25232.2	31.74%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-0.000e+00	1.0000	6305.0	7.94%	6924.8	8.71%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e0	-0.000e+00	1.0000	2442.0	3.08%	2845.6	3.58%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-0.000e+00	1.0000	1846.0	2.32%	2204.3	2.77%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-0.000e+00	1.0000	1954.0	2.46%	2325.4	2.93%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-0.000e+00	1.0000	4057.0	5.11%	4583.4	5.77%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-0.000e+00	1.0000	4280.0	5.39%	4819.4	6.06%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-0.000e+00	1.0000	2290.0	2.88%	2700.7	3.40%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	0.000e+00	1.0000	12016.0	15.13%	13471.0	16.94%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	0.000e+00	1.0000	12551.0	15.81%	13457.0	16.93%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	0.000e+00	1.0000	6507.0	8.19%	7212.2	9.07%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	0.000e+00	1.0000	11317.0	14.25%	12649.0	15.91%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	0.000e+00	1.0000	15335.0	19.31%	16863.7	21.21%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	0.000e+00	1.0000	9700.0	12.22%	10629.8	13.37%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	0.000e+00	1.0000	13401.0	16.88%	14356.1	18.06%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	0.000e+00	1.0000	6167.0	7.77%	6956.8	8.75%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	0.000e+00	1.0000	9600.0	12.09%	10648.4	13.39%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	0.000e+00	1.0000	8121.0	10.23%	8953.1	11.26%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	0.000e+00	1.0000	4649.0	5.85%	5358.0	6.74%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	0.000e+00	1.0000	7484.0	9.43%	8449.1	10.63%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	0.000e+00	1.0000	4192.0	5.28%	4821.3	6.06%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	1466.0	1.85%	1805.1	2.27%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	0.000e+00	1.0000	16283.0	20.51%	17392.5	21.88%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	0.000e+00	1.0000	13457.0	16.95%	14789.8	18.60%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	0.000e+00	1.0000	14821.0	18.67%	15919.2	20.02%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	0.000e+00	1.0000	12359.0	15.56%	13310.5	16.74%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	0.000e+00	1.0000	10030.0	12.63%	10836.4	13.63%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	0.000e+00	1.0000	6064.0	7.64%	6740.6	8.48%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	0.000e+00	1.0000	7595.0	9.56%	8382.7	10.54%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	0.000e+00	1.0000	3760.0	4.74%	4420.0	5.56%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	0.000e+00	1.0000	3709.0	4.67%	4330.9	5.45%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	0.000e+00	1.0000	17861.0	22.49%	19265.3	24.23%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	0.000e+00	1.0000	24600.0	30.98%	25846.3	32.51%