Information for 7-CCGAGCGCTC (Motif 10)


Reverse Opposite:

p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.920
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif556.8
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets735.4 +/- 267.5bp
Average Position of motif in Background688.7 +/- 343.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGAGCGCTC----
TGGCGCGCGCGCCTGA

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGAGCGCTC
CGGAGC----

POL001.1_MTE/Jaspar

Match Rank:3
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CCGAGCGCTC--
TTTCGAGCGGAACGGTCGC

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGAGCGCTC-----
CGAACAGTGCTCACTAT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGAGCGCTC
--CAGCC---

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGCGCTC----
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGCGCTC----
ANCGCGCGCCCTTNN

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCGAGCGCTC-
TTGACCGAGAATTCC

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCGAGCGCTC---
GGGCCGTGTGCAAAAA

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGCGCTC----
NNNGGGGCGCCCCCNN