Information for 4-AGCGCCCCTCAT (Motif 11)


Reverse Opposite:

p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.859
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets643.3 +/- 262.3bp
Average Position of motif in Background542.3 +/- 266.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCCTCAT-
ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGCGCCCCTCAT-
TCACCCCGCCCCAAATT

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCCCTCAT--
AAGCCCCCCAAAAAT

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGCGCCCCTCAT
TTGGGGGCGCCCCTAG-

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCGCCCCTCAT
-TTCCCCCTAC-

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCGCCCCTCAT-----
NTCNTCCCCTATNNGNN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCGCCCCTCAT-
--AGCCACTCAAG

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCCCTCAT---
CCCCCCCCCCCACTTG

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCGCCCCTCAT--
NNAGTCCCACTCNNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCCCTCAT--
GGTCCCGCCCCCTTCTC