Information for 8-TCGGCTGCGG (Motif 15)


Reverse Opposite:

p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.834
Number of Target Sequences with motif180.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif2470.9
Percentage of Background Sequences with motif5.53%
Average Position of motif in Targets718.5 +/- 275.4bp
Average Position of motif in Background691.6 +/- 337.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0048.1_NHLH1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCGGCTGCGG
NCGCAGCTGCGN

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCGGCTGCGG
--NGCTN---

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCGGCTGCGG
---GCTGTG-

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGGCTGCGG
---GCTCCG-

MA0500.1_Myog/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCGGCTGCGG
GACAGCTGCAG

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCGGCTGCGG
NCAGCTGCTG

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGGCTGCGG
NAHCAGCTGD--

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCGGCTGCGG---
CTCAGCAGCTGCTACTG

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCGGCTGCGG
CACAGCTGCAG

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCGGCTGCGG-
AGCAGCTGCTNN