Information for 9-ATGAATCACC (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.638e+01
Information Content per bp:1.848
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif262.8
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets469.5 +/- 267.7bp
Average Position of motif in Background464.5 +/- 284.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0491.1_JUND/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATGAATCACC
NATGAGTCACN

MA0476.1_FOS/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATGAATCACC
NATGAGTCANN

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-ATGAATCACC
NATGAGTCACC

MA0490.1_JUNB/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATGAATCACC-
ATGAGTCATCN

PB0142.1_Jundm2_2/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATGAATCACC--
ATTGATGAGTCACCAA

MA0478.1_FOSL2/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATGAATCACC-
NTGAGTCATCN

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATGAATCACC-
NATGACTCATNN

MA0462.1_BATF::JUN/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGAATCACC
GAAATGACTCA--

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATGAATCACC
NNATGASTCATH

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATGAATCACC----
ATGAGTCATNTNNT