Information for 10-GATGCGACTT (Motif 19)


Reverse Opposite:

p-value:1e-11
log p-value:-2.548e+01
Information Content per bp:1.787
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif247.2
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets566.4 +/- 274.2bp
Average Position of motif in Background538.6 +/- 320.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATGCGACTT-----
ACATGCTACCTAATAC

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATGCGACTT-----
ACTTGCTACCTACACC

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATGCGACTT-----
TTTTACGACTTTCCAT

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GATGCGACTT--
---NCCACTTAN

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GATGCGACTT
GTGCCACGCGACTG

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GATGCGACTT------
TAAGCCACTTGAAATT

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATGCGACTT
MTGATGCAAT--

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GATGCGACTT------
TAAGCCACTTGAATTT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GATGCGACTT-----
NNATTGGACTTTNGNN

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GATGCGACTT------
TAAGCCACTTAACATT