Information for 13-GTGGAGGTTA (Motif 25)


Reverse Opposite:

p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.814
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif5.35%
Number of Background Sequences with motif1125.8
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets478.0 +/- 277.0bp
Average Position of motif in Background535.0 +/- 319.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGAGGTTA
GTGGAT----

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGGAGGTTA
--GGCVGTTR

MA0131.1_HINFP/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGGAGGTTA
GCGGACGTTN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGAGGTTA
NNTGTGGTTT

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGAGGTTA------
AGAGGGGATTAATTTAT

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGGAGGTTA---
NNNATTGGGGGTNTCCT

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGGAGGTTA----
CGTTGGGGATTAGCCT

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGGAGGTTA-
---RGGATTAR

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGGAGGTTA-
-TGGCAGTTGG

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGGAGGTTA-----
TGAGGGGGATTAACTAT