Information for 15-TGTTGCTMGAAA (Motif 27)


Reverse Opposite:

p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.646
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif69.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets397.5 +/- 289.1bp
Average Position of motif in Background446.6 +/- 277.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0006.1_Bcl6b_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGCTMGAAA--
NNNATTCCTCGAAAGN

MA0463.1_Bcl6/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTTGCTMGAAA---
-TTTCCTAGAAAGCA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTTGCTMGAAA----
-TTTCCTGGAAAGNNN

MA0137.3_STAT1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTTGCTMGAAA
-TTTCCTGGAAA

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTTGCTMGAAA-
-TTCGCGCGAAAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTTGCTMGAAA--
--TGGCGGGAAAHB

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTTGCTMGAAA-
-TTTCCNGGAAAN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGTTGCTMGAAA-
---GGCGGGAAAH

MA0152.1_NFATC2/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGTTGCTMGAAA-
------TGGAAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTTGCTMGAAA-
NATTTCCNGGAAAT