Information for 16-AAAGGGGGAAAT (Motif 28)


Reverse Opposite:

p-value:1e-10
log p-value:-2.366e+01
Information Content per bp:1.851
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif143.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets455.6 +/- 316.9bp
Average Position of motif in Background587.7 +/- 299.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0057.1_MZF1_5-13/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGGGGGAAAT
GGAGGGGGAA--

MA0080.3_Spi1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGGGAAAT--
AAAAAGAGGAAGTGA

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAAGGGGGAAAT-
-AAAGRGGAAGTG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGGGGGAAAT--
TTAAGAGGAAGTTA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAAGGGGGAAAT
---TGGGGA---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAGGGGGAAAT
--GGCGGGAARN

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAAGGGGGAAAT
TGCGCATAGGGGAGGAG

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAAGGGGGAAAT--
-AACAAGGAAGTAA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGGGGGAAAT
--GGCGGGAAAH

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAGGGGGAAAT-
-TGGCGGGAAAHB