Information for 19-ATGATGACAAAC (Motif 31)


Reverse Opposite:

p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.840
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif108.6
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets506.8 +/- 319.2bp
Average Position of motif in Background473.1 +/- 300.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGATGACAAAC---
ATTTACGACAAATAGC

MA0488.1_JUN/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATGATGACAAAC
AAGATGATGTCAT--

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGATGACAAAC
--CATGAC----

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGATGACAAAC
AAAGATGATGTCATC-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATGATGACAAAC
GGTGYTGACAGS-

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATGATGACAAAC
GAATGACGAATAAC

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGATGACAAAC
ATGATGCAAT--

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGATGACAAAC
GATGACGTCA---

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGATGACAAAC--
AAAAATAACAAACGG

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGATGACAAAC
MTGATGCAAT--