| p-value: | 1e-9 |
| log p-value: | -2.173e+01 |
| Information Content per bp: | 1.876 |
| Number of Target Sequences with motif | 11.0 |
| Percentage of Target Sequences with motif | 0.59% |
| Number of Background Sequences with motif | 12.2 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 533.6 +/- 208.7bp |
| Average Position of motif in Background | 407.4 +/- 183.8bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0077.1_SOX9/Jaspar
| Match Rank: | 1 |
| Score: | 0.76
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AAACAATAGCGA
GAACAATGG--- |
|
|
|
MA0087.1_Sox5/Jaspar
| Match Rank: | 2 |
| Score: | 0.73
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AAACAATAGCGA
NAACAAT----- |
|
|
|
MA0084.1_SRY/Jaspar
| Match Rank: | 3 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --AAACAATAGCGA
GTAAACAAT----- |
|
|
|
PB0073.1_Sox7_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.71
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------AAACAATAGCGA----
AATAAAGAACAATAGAATTTCA |
|
|
|
PB0183.1_Sry_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.70
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----AAACAATAGCGA
TCACGGAACAATAGGTG |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 6 |
| Score: | 0.70
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | AAACAATAGCGA
GAACAATGGN-- |
|
|
|
MA0040.1_Foxq1/Jaspar
| Match Rank: | 7 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---AAACAATAGCGA
AATAAACAATN---- |
|
|
|
PB0168.1_Sox14_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---AAACAATAGCGA
CTCACACAATGGCGC |
|
|
|
PB0065.1_Sox15_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.69
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----AAACAATAGCGA-
TAGTGAACAATAGATTT |
|
|
|
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
| Match Rank: | 10 |
| Score: | 0.69
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -AAACAATAGCGA
RNAACAATGG--- |
|
|
|
