Information for 15-GACTGGTAGC (Motif 33)


Reverse Opposite:

p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.825
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif251.2
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets583.5 +/- 281.2bp
Average Position of motif in Background547.5 +/- 295.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGTAGC----
NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGTAGC----
NNTGTAGGTAGCANNT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GACTGGTAGC--
CAATCACTGGCAGAAT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACTGGTAGC
NTGATTGACAGN

MA0498.1_Meis1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GACTGGTAGC-
NNNTGAGTGACAGCT

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACTGGTAGC-
TGAGTGACAGSC

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGGTAGC-
GGATTGACAGGTCNTT

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGGTAGC-
NTATTGACAGCTNNTT

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGGTAGC-
NTATTGACAGGTNNTN

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACTGGTAGC-
GTATTGACAGGTNNTT