Information for 18-CAAGCGTCAT (Motif 35)


Reverse Opposite:

p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.843
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif191.8
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets597.4 +/- 268.0bp
Average Position of motif in Background550.0 +/- 284.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAAGCGTCAT-
-----GTCATN

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAGCGTCAT--
NTTATTCGTCATNC

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGCGTCAT
CAAGCTT---

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAAGCGTCAT---
TCTCAAAGGTCACGAG

MA0017.1_NR2F1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGCGTCAT
AGGTTCAAAGGTCA-

MA0491.1_JUND/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGCGTCAT-
NATGAGTCACN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAAGCGTCAT
---ACGTCA-

MA0069.1_Pax6/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCGTCAT
AANTCATGCGTGAA

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGCGTCAT
-AACCGANA-

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAAGCGTCAT---
TCTCAAAGGTCACCTG