Information for 20-AACTTTCGCT (Motif 36)


Reverse Opposite:

p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.931
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets536.2 +/- 277.3bp
Average Position of motif in Background496.7 +/- 334.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AACTTTCGCT---
-ACTTTCACTTTC

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTCGCT----
TCACTTTCACTTTCN

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AACTTTCGCT---
-ACTTTCGTTTCT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AACTTTCGCT---
-RSTTTCRSTTTC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AACTTTCGCT---
-ACTTTCACTTTC

PB0058.1_Sfpi1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTCGCT---
NNACTTCCTCTTNN

MA0051.1_IRF2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AACTTTCGCT----
GTTTTGCTTTCACTTTCC

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AACTTTCGCT-
-ACTTCCGGTT

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AACTTTCGCT---
NNAATTCTCGNTNAN

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTCGCT----
TNAGTTTCGATTTTN