Information for 24-GATCCCCCCC (Motif 40)


Reverse Opposite:

p-value:1e-4
log p-value:-1.093e+01
Information Content per bp:1.863
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif545.2
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets542.9 +/- 276.1bp
Average Position of motif in Background577.9 +/- 302.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GATCCCCCCC---
NNNNGGTACCCCCCANN

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GATCCCCCCC------
AAATTCCCCCCGGAAGT

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GATCCCCCCC
GGTCCCGCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GATCCCCCCC-
---CCCCCCCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GATCCCCCCC------
CCCCCCCCCCCACTTG

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GATCCCCCCC--
TATCGACCCCCCACAG

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GATCCCCCCC
--TCCCCA--

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GATCCCCCCC----
NNAGTCCCACTCNNNN

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GATCCCCCCC-
ANANGTGATACCCCATT

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATCCCCCCC------
-AAGCCCCCCAAAAAT