Information for 8-ATGCCGTT (Motif 41)


Reverse Opposite:

p-value:1e-4
log p-value:-1.021e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif200.8
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets499.8 +/- 266.6bp
Average Position of motif in Background551.5 +/- 313.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATGCCGTT--
BRRCVGTTDN

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATGCCGTT-
-GGCVGTTR

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGCCGTT
-TGACGT-

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGCCGTT
TGTCGGTT

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCGTT----
NNNNATGCGGGTNNNN

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGCCGTT-----
ATGGAAACCGTTATTTT

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGCCGTT-----
TTGAAAACCGTTAATTT

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGCCGTT--
TGGCAGTTGG

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCGTT-----
NNNNATGACCTTGANTN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATGCCGTT-----
NNNANTGCAGTGCNNTT