Information for 23-TGAGATATATAC (Motif 42)


Reverse Opposite:

p-value:1e-4
log p-value:-9.619e+00
Information Content per bp:1.963
Number of Target Sequences with motif1094.0
Percentage of Target Sequences with motif58.57%
Number of Background Sequences with motif24159.3
Percentage of Background Sequences with motif54.05%
Average Position of motif in Targets449.9 +/- 288.1bp
Average Position of motif in Background469.4 +/- 286.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGAGATATATAC----
ATGGGATATATCCGCCT

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGAGATATATAC--
GACAGAGATATCAGTGT

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATATATAC-
NNTATANATATACN

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGATATATAC---
TCTTTATATATAAATA

MA0033.1_FOXL1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAGATATATAC
---TATACATA-

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGAGATATATAC
NNNNNNCTTTTATAN

MA0108.2_TBP/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGAGATATATAC
NNNNNNCTTTTATAN

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TGAGATATATAC
TATTATGGGATGGATAA

PH0045.1_Hoxa1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGAGATATATAC---
CTGAGCTAATTACCGT

MA0485.1_Hoxc9/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGAGATATATAC--
-NTGATTTATGGCC