Information for 24-TCTGCAGGGGGA (Motif 43)


Reverse Opposite:

p-value:1e-2
log p-value:-6.836e+00
Information Content per bp:1.974
Number of Target Sequences with motif1299.0
Percentage of Target Sequences with motif69.54%
Number of Background Sequences with motif29547.3
Percentage of Background Sequences with motif66.11%
Average Position of motif in Targets578.4 +/- 291.6bp
Average Position of motif in Background576.8 +/- 324.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGGGGGA
CACAGCAGGGGG-

MA0057.1_MZF1_5-13/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCTGCAGGGGGA-
---GGAGGGGGAA

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAGGGGGA----
ANTNCCGGGGGGAANTT

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.64
Offset:6
Orientation:forward strand
Alignment:TCTGCAGGGGGA
------TGGGGA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCAGGGGGA-------
GCCASCAGGGGGCGCYVNNG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCAGGGGGA--
NNNANTGCAGTGCNNTT

MA0154.2_EBF1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGGGGGA
GTCCCCAGGGA--

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTGCAGGGGGA----
TGCGGAGTGGGACTGG

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTGCAGGGGGA
--NNCAGGTGNN

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTGCAGGGGGA
GTCCCCAGGGGA-