Information for 3-TTKCAACAMC (Motif 5)


Reverse Opposite:

p-value:1e-13
log p-value:-3.082e+01
Information Content per bp:1.469
Number of Target Sequences with motif243.0
Percentage of Target Sequences with motif13.01%
Number of Background Sequences with motif3497.2
Percentage of Background Sequences with motif7.82%
Average Position of motif in Targets493.9 +/- 299.7bp
Average Position of motif in Background529.3 +/- 305.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TTKCAACAMC
TTGCAACATN

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TTKCAACAMC
ATTGCATCAT-

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTKCAACAMC
ATTGCATCAK-

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTKCAACAMC
SCTGTCARCACC

MA0133.1_BRCA1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTKCAACAMC
--ACAACAC-

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTKCAACAMC
TACCATAGCAACGGT

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------TTKCAACAMC----
TGTGACCCTTAGCAACCGATTAA

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTKCAACAMC
SCCTAGCAACAG-

MA0466.1_CEBPB/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTKCAACAMC
TATTGCACAAT-

MA0102.3_CEBPA/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTKCAACAMC
ATTGCACAATA