Information for 5-GTGGATATGT (Motif 8)


Reverse Opposite:

p-value:1e-12
log p-value:-2.892e+01
Information Content per bp:1.581
Number of Target Sequences with motif187.0
Percentage of Target Sequences with motif10.01%
Number of Background Sequences with motif2521.1
Percentage of Background Sequences with motif5.64%
Average Position of motif in Targets480.0 +/- 269.3bp
Average Position of motif in Background487.9 +/- 289.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0130.1_ZNF354C/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGATATGT
GTGGAT----

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTGGATATGT-----
ANNNGGATATATCCNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGGATATGT
NNTGTGGATTSS-

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GTGGATATGT---
-----TATGTNTA

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGGATATGT
ATGMATATDC

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGATATGT-
AAGGATATNTN

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGATATGT
TGTGGATTNNN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGGATATGT
NNTGTGGTTT---

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTGGATATGT
NNHTGTGGTTWN--

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTGGATATGT
GTCTGTGGTTT---