Information for 1-GGGGGCGGGGCC (Motif 1)


Reverse Opposite:

p-value:1e-20
log p-value:-4.611e+01
Information Content per bp:1.707
Number of Target Sequences with motif877.0
Percentage of Target Sequences with motif32.08%
Number of Background Sequences with motif10039.3
Percentage of Background Sequences with motif23.97%
Average Position of motif in Targets818.1 +/- 221.8bp
Average Position of motif in Background798.2 +/- 290.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGGGGCGGGGCC
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGGGGCC-
AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGCGGGGCC
GGGNGGGGGCGGGGC-

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGGGCGGGGCC
GGGGGCGGGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GGGGGCGGGGCC
-DGGGYGKGGC-

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGCGGGGCC
NNNAAGGGGGCGGGNNN

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GGGGGCGGGGCC
-GGGGNGGGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GGGGGCGGGGCC--
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGGGGCGGGGCC
-TGGGTGGGGC-

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGGGGCGGGGCC--
CAAAGGCGTGGCCAG