Information for 7-TACTAGTTTTTA (Motif 10)


Reverse Opposite:

p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.845
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets449.1 +/- 238.4bp
Average Position of motif in Background327.3 +/- 258.0bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TACTAGTTTTTA
CCTTAATNGNTTTT-

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TACTAGTTTTTA--
GAAAACTAGTTAACATC

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TACTAGTTTTTA-
TTTTACGACTTTCCAT

PH0044.1_Homez/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TACTAGTTTTTA--
AAAACATCGTTTTTAAG

MA0040.1_Foxq1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACTAGTTTTTA--
---TATTGTTTATT

PB0141.1_Isgf3g_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACTAGTTTTTA--
NNGTANTGTTTTNC

MA0497.1_MEF2C/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TACTAGTTTTTA---
TTCTATTTTTAGNNN

MA0153.1_HNF1B/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TACTAGTTTTTA--
--TTAATATTTAAC

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TACTAGTTTTTA-----
-------TTTTATTRGN

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TACTAGTTTTTA---
------TGTTTATTT