Information for 11-TGGAGAAGTCGA (Motif 14)


Reverse Opposite:

p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.572
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif50.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets548.5 +/- 229.4bp
Average Position of motif in Background560.5 +/- 238.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGAGAAGTCGA
TGGAAAA-----

MA0105.3_NFKB1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAGAAGTCGA
-GGGAAATTCCC

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAAGTCGA
AATGGAAAAT----

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGAGAAGTCGA----
ATGGAAAGTCGTAAAA

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGAGAAGTCGA
TGGGGA------

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGGAGAAGTCGA-----
NANTGGAAAAANTGAGTCAN

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGGAGAAGTCGA----
GGCAAAAGTCCAATAA

MA0101.1_REL/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGAGAAGTCGA
-GGAAANCCCC-

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGGAGAAGTCGA
-GGAAATCCCC-

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TGGAGAAGTCGA
TTAAGAGGAAGTTA-