Information for 3-GTAGTCGT (Motif 17)


Reverse Opposite:

p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.794
Number of Target Sequences with motif354.0
Percentage of Target Sequences with motif12.95%
Number of Background Sequences with motif3820.5
Percentage of Background Sequences with motif9.12%
Average Position of motif in Targets591.4 +/- 289.3bp
Average Position of motif in Background567.5 +/- 337.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GTAGTCGT---
NNANTGGTGGTCTTNNN

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTCGT----
GNNATTTGTCGTAANN

MA0027.1_En1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTAGTCGT-
AAGTAGTGCCC

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAACGT

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAATAG

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GTAGTCGT
GGTAAGTA-----

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTCGT---
NNNTGTTGTTGTTNG

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTAGTCGT----
ATGGAAAGTCGTAAAA

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT-------
TAAAGTCGTAAAACAT

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTAGTCGT--------
TAAGGTCGTAAAATCCT