Information for 1-CCGGAAGT (Motif 2)


Reverse Opposite:

p-value:1e-16
log p-value:-3.767e+01
Information Content per bp:1.820
Number of Target Sequences with motif1139.0
Percentage of Target Sequences with motif41.66%
Number of Background Sequences with motif14132.0
Percentage of Background Sequences with motif33.74%
Average Position of motif in Targets795.8 +/- 253.5bp
Average Position of motif in Background764.9 +/- 332.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
ANCCGGAAGT

ETS(ETS)/Promoter/Homer

Match Rank:2
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
AACCGGAAGT

MA0062.2_GABPA/Jaspar

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CCGGAAGT---
CCGGAAGTGGC

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
NACCGGAAGT

MA0076.2_ELK4/Jaspar

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAAGT--
NCCGGAAGTGG

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAAGT-
RCCGGAAGTD

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--CCGGAAGT
AACCGGAAGT

PB0020.1_Gabpa_1/Jaspar

Match Rank:8
Score:0.94
Offset:-5
Orientation:forward strand
Alignment:-----CCGGAAGT----
CAATACCGGAAGTGTAA

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-CCGGAAGT-
RCCGGAARYN

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.92
Offset:-5
Orientation:forward strand
Alignment:-----CCGGAAGT--
AGGACCCGGAAGTAA