Information for 11-TTCGAGACTA (Motif 21)


Reverse Opposite:

p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.798
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif157.2
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets565.3 +/- 295.6bp
Average Position of motif in Background538.1 +/- 355.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCGAGACTA----
CTGATCGAAACCAAAGT

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCGAGACTA--
CGTATCGAAACCAAA

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TTCGAGACTA-
ATAAACCGAAACCAA

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCGAGACTA--
GNNACCGAGAATNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTCGAGACTA--
TTGACCGAGAATTCC

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTCGAGACTA-
CAAAATCGAAACTAA

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTCGAGACTA
--BCAGACWA

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCGAGACTA
--CCAGACAG

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCGAGACTA--
NNNACCGAGAGTNNN

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCGAGACTA-------
TACGAGACTCCTCTAAC