Information for 14-CGTGGCGTCAGC (Motif 22)


Reverse Opposite:

p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.808
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif114.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets764.3 +/- 295.8bp
Average Position of motif in Background739.9 +/- 335.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CGTGGCGTCAGC-
-GTGACGTCACCG

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGTGGCGTCAGC-
-RTGACGTCAYCN

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CGTGGCGTCAGC
--TGACGTCATC

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGTGGCGTCAGC-
-ATGACGTCAYYN

MA0018.2_CREB1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGTGGCGTCAGC
--TGACGTCA--

MA0117.1_Mafb/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CGTGGCGTCAGC
----NCGTCAGC

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGTGGCGTCAGC-
-ATGACGTCATCN

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGTGGCGTCAGC-
-ATGACGTCATCN

PB0004.1_Atf1_1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGTGGCGTCAGC--
ACGATGACGTCATCGA

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTGGCGTCAGC--
NCGATGACGTCATCGN