Information for 16-TTAAGCATATGA (Motif 26)


Reverse Opposite:

p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.564
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets321.8 +/- 272.2bp
Average Position of motif in Background408.1 +/- 292.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTAAGCATATGA
-TAAGTAT----

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTAAGCATATGA--
CTTTAAGTACTTAATG

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGCATATGA-
GANGTTAACTAGTTTNN

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGCATATGA--
NATTTAAGTACTTANNA

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTAAGCATATGA---
TTTTAAGTACTTAAATT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTAAGCATATGA-
--AAGGATATNTN

MA0058.2_MAX/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTAAGCATATGA
--AAGCACATGG

MA0147.2_Myc/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTAAGCATATGA
--AAGCACATGG

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTAAGCATATGA
ACTTAGTTAACTAAAAA-

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TTAAGCATATGA
AGCTGTTAACTAGCCGT