Information for 18-CTGCGCATGCGC (Motif 28)


Reverse Opposite:

p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.704
Number of Target Sequences with motif503.0
Percentage of Target Sequences with motif18.40%
Number of Background Sequences with motif5926.0
Percentage of Background Sequences with motif14.15%
Average Position of motif in Targets865.5 +/- 187.6bp
Average Position of motif in Background854.3 +/- 260.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.99
Offset:0
Orientation:forward strand
Alignment:CTGCGCATGCGC
CTGCGCATGCGC

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CTGCGCATGCGC
GTGCGCATGCGC

MA0506.1_NRF1/Jaspar

Match Rank:3
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:CTGCGCATGCGC
-TGCGCAGGCGC

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCGCATGCGC----
TGGCGCGCGCGCCTGA

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGCGCATGCGC-
NNTTTGCACACGGCCC

PB0010.1_Egr1_1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGCGCATGCGC---
-TCCGCCCCCGCATT

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTGCGCATGCGC
-TGCGTGGGYG-

MA0058.2_MAX/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTGCGCATGCGC--
----CCATGTGCTT

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTGCGCATGCGC----
NNGCGTGTGTGCNGCN

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTGCGCATGCGC-----
ATCCACAGGTGCGAAAA