Information for 13-ACGGCGTCAT (Motif 29)


Reverse Opposite:

p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.591
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif190.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets761.8 +/- 245.4bp
Average Position of motif in Background673.7 +/- 338.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:1
Score:0.81
Offset:5
Orientation:reverse strand
Alignment:ACGGCGTCAT-
-----GTCATN

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCGTCAT
NGATGACGTCAT

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ACGGCGTCAT----
TNNNNGGTGTCATNTNT

MA0018.2_CREB1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACGGCGTCAT
-TGACGTCA-

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACGGCGTCAT-
-TGACGTCATC

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ACGGCGTCAT
---ACGTCA-

PB0038.1_Jundm2_1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACGGCGTCAT---
CCGATGACGTCATCGT

MA0492.1_JUND_(var.2)/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACGGCGTCAT----
NATGACATCATCNNN

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACGGCGTCAT---
ATGACATCATCNN

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACGGCGTCAT
NGATGACGTCAT