Information for 17-TTATTGGCGT (Motif 31)


Reverse Opposite:

p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.583
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif320.2
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets584.8 +/- 308.7bp
Average Position of motif in Background522.3 +/- 306.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTATTGGCGT----
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTATTGGCGT----
TNTAATTTGCATACNA

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTATTGGCGT--
--ATTTGCATAA

MA0507.1_POU2F2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTATTGGCGT--
TTCATTTGCATAT

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTATTGGCGT
CCGATTGGCT-

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TTATTGGCGT
NNAATTTTATTGGNTN

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTATTGGCGT--
--ATTTGCATAT

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTATTGGCGT
---TTGGCA-

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTATTGGCGT
----TGACGT

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTATTGGCGT--
TGATTGGCTANN