Information for 21-CAGCGATTCG (Motif 33)


Reverse Opposite:

p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.649
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif973.7
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets684.0 +/- 267.0bp
Average Position of motif in Background645.3 +/- 340.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0038.1_Gfi1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGCGATTCG
CNGTGATTTN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGATTCG
GCAGTGATTT-

MA0483.1_Gfi1b/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGATTCG
TGCTGTGATTT-

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CAGCGATTCG
NNNNTGCCAGTGATTG-

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGCGATTCG
CAGCC-----

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGCGATTCG
NTATYGATCH-

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CAGCGATTCG--
--CCGATTGGCT

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGCGATTCG-
-VRGGATTARN

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGCGATTCG
--RGGATTAR

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGATTCG
CACAGN------