Information for 21-CTGTGTACTGGG (Motif 35)


Reverse Opposite:

p-value:1e-6
log p-value:-1.450e+01
Information Content per bp:1.754
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif71.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets435.2 +/- 239.3bp
Average Position of motif in Background464.1 +/- 230.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGTGTACTGGG
CTGTTTAC----

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTGTGTACTGGG
NYYTGTTTACHN--

MA0480.1_Foxo1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGTGTACTGGG
TCCTGTTTACA---

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTACTGGG----
NSTGTTTRCWCAGBNNN

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTACTGGG
TNTGTTTACTT--

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTACTGGG
GCTGTG-------

MA0479.1_FOXH1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGTGTACTGGG
-TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTACTGGG
NNTGTGGATTSS-

MA0031.1_FOXD1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGTGTACTGGG
ATGTTTAC----

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTACTGGG
NNGCGTGTGTGCNGCN