Information for 24-GATTCTACGGGT (Motif 39)


Reverse Opposite:

p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.901
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets574.0 +/- 332.1bp
Average Position of motif in Background518.0 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GATTCTACGGGT----
NNNNATGCGGGTNNNN

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------GATTCTACGGGT----
NTNNNNNGTTGCTANGGNNCANA

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GATTCTACGGGT-
AGNGTTCTAATGANN

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GATTCTACGGGT---
ANATTTTACGAGNNNN

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GATTCTACGGGT-------
--GGCGAGGGGTCAAGGGC

MA0057.1_MZF1_5-13/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GATTCTACGGGT--
----GGAGGGGGAA

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GATTCTACGGGT--
NNAATTTTATTGGNTN

MA0090.1_TEAD1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GATTCTACGGGT
CACATTCCTCCG--

MA0009.1_T/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GATTCTACGGGT---
----CTAGGTGTGAA

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GATTCTACGGGT--
NNANTTTTATTGGNNN