Information for 2-TCCCAGRATGCC (Motif 4)


Reverse Opposite:

p-value:1e-13
log p-value:-3.059e+01
Information Content per bp:1.607
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif1103.1
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets646.4 +/- 297.0bp
Average Position of motif in Background675.6 +/- 310.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGRATGCC
ATTTCCCAGVAKSCY

MA0088.1_znf143/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCCCAGRATGCC----
GATTTCCCATAATGCCTTGC

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGRATGCC
ATTTCCAAGAA----

MA0144.2_STAT3/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAGRATGCC
TTTCCCAGAAN---

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAGRATGCC-
TGWCCTCARNTGACC

MA0137.3_STAT1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCCAGRATGCC
TTTCCTGGAAA---

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------TCCCAGRATGCC
AACTACAATTCCCAGAATGC-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGRATGCC
HTTTCCCASG-----

MA0518.1_Stat4/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCCCAGRATGCC
NNNTTTCCTGGAAA---

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGRATGCC-
GAGCACAGCAGGACA