Information for 9-YBCTGATTGGCY (Motif 10)


Reverse Opposite:

p-value:1e-195
log p-value:-4.492e+02
Information Content per bp:1.616
Number of Target Sequences with motif3663.0
Percentage of Target Sequences with motif10.61%
Number of Background Sequences with motif2144.4
Percentage of Background Sequences with motif6.35%
Average Position of motif in Targets299.2 +/- 119.0bp
Average Position of motif in Background257.9 +/- 152.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:reverse strand
Alignment:YBCTGATTGGCY
--CCGATTGGCT

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.94
Offset:3
Orientation:reverse strand
Alignment:YBCTGATTGGCY---
---TGATTGGCTANN

MA0502.1_NFYB/Jaspar

Match Rank:3
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:YBCTGATTGGCY-----
--CTGATTGGTCNATTT

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----YBCTGATTGGCY--
AGAGTGCTGATTGGTCCA

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.78
Offset:6
Orientation:forward strand
Alignment:YBCTGATTGGCY
------TTGGCA

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---YBCTGATTGGCY--
NNNNGTTGATTGGGTCG

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YBCTGATTGGCY
CNGTGATTTN--

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-YBCTGATTGGCY---
GNNTTAATTGGTTGTT

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---YBCTGATTGGCY-
NNAATTTTATTGGNTN

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--YBCTGATTGGCY--
ACTCCTAATTAGTCGT